Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC093726.1-201ENST00000608064 963 ntBASIC12.92□□□□□ -0.34
ZNF48Q96MX3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.92□□□□□ -0.34
ZNF48Q96MX3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 AL596087.1-201ENST00000400979 1969 ntBASIC12.91□□□□□ -0.34
ZNF48Q96MX3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 FO393414.2-201ENST00000405153 598 ntBASIC12.91□□□□□ -0.34
ZNF48Q96MX3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TMEM14DP-201ENST00000422205 345 ntBASIC12.91□□□□□ -0.34
ZNF48Q96MX3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 KRT17P8-201ENST00000540749 863 ntBASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 AC017083.2-201ENST00000608069 979 ntBASIC12.91□□□□□ -0.34
ZNF48Q96MX3 MIR8072-201ENST00000614241 80 ntBASIC12.91□□□□□ -0.34
ZNF48Q96MX3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF48Q96MX3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF48Q96MX3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms