Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ALPK3Q96L96 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AC114812.1-204ENST00000449669 728 ntBASIC16.84■□□□□ 0.29
ALPK3Q96L96 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 MIR6842-201ENST00000612539 65 ntBASIC16.84■□□□□ 0.29
ALPK3Q96L96 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.84■□□□□ 0.29
ALPK3Q96L96 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ALPK3Q96L96 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ALPK3Q96L96 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALPK3Q96L96 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ALPK3Q96L96 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ALPK3Q96L96 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ALPK3Q96L96 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ALPK3Q96L96 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 NDUFS6P1-201ENST00000485187 316 ntBASIC16.83■□□□□ 0.28
ALPK3Q96L96 AC010234.1-201ENST00000494599 870 ntBASIC16.83■□□□□ 0.28
ALPK3Q96L96 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 MIR4683-201ENST00000579659 81 ntBASIC16.83■□□□□ 0.28
ALPK3Q96L96 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 AL358472.3-201ENST00000608147 415 ntBASIC16.83■□□□□ 0.28
ALPK3Q96L96 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
ALPK3Q96L96 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 UBALD1-205ENST00000590891 2641 ntBASIC16.83■□□□□ 0.28
ALPK3Q96L96 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ALPK3Q96L96 AC018892.3-201ENST00000623986 2499 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AC009955.4-201ENST00000597192 544 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 KRT8P29-201ENST00000420409 1371 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AC078925.2-201ENST00000624013 1973 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AC099398.1-201ENST00000567919 2776 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms