Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TM9SF4Q92544 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TM9SF4Q92544 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TM9SF4Q92544 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TM9SF4Q92544 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TM9SF4Q92544 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 AL136379.1-201ENST00000623471 2642 ntBASIC15.02■□□□□ -0
TM9SF4Q92544 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.02■□□□□ -0
TM9SF4Q92544 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.02■□□□□ -0
TM9SF4Q92544 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.02■□□□□ -0
TM9SF4Q92544 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF4Q92544 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.02■□□□□ -0
TM9SF4Q92544 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF4Q92544 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF4Q92544 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.02■□□□□ -0
TM9SF4Q92544 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TM9SF4Q92544 AL844908.2-201ENST00000609461 460 ntBASIC15.02■□□□□ -0
TM9SF4Q92544 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.02■□□□□ -0
TM9SF4Q92544 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.02■□□□□ -0
TM9SF4Q92544 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.02■□□□□ -0
TM9SF4Q92544 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.02■□□□□ -0
TM9SF4Q92544 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.02■□□□□ -0
TM9SF4Q92544 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.02■□□□□ -0
TM9SF4Q92544 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TM9SF4Q92544 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF4Q92544 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF4Q92544 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TM9SF4Q92544 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
TM9SF4Q92544 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.02□□□□□ -0.01
TM9SF4Q92544 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF4Q92544 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF4Q92544 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TM9SF4Q92544 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.02□□□□□ -0.01
TM9SF4Q92544 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF4Q92544 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF4Q92544 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TM9SF4Q92544 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 AC011495.1-201ENST00000498085 584 ntBASIC15.01□□□□□ -0.01
TM9SF4Q92544 AC093004.1-201ENST00000508850 424 ntBASIC15.01□□□□□ -0.01
TM9SF4Q92544 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 AC009407.1-201ENST00000568958 598 ntBASIC15.01□□□□□ -0.01
TM9SF4Q92544 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 AC008738.7-201ENST00000609744 511 ntBASIC15.01□□□□□ -0.01
TM9SF4Q92544 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.01□□□□□ -0.01
TM9SF4Q92544 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TM9SF4Q92544 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15□□□□□ -0.01
TM9SF4Q92544 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TM9SF4Q92544 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15□□□□□ -0.01
TM9SF4Q92544 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms