Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 FGFR3P6-201ENST00000457012 610 ntBASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 AC002347.1-201ENST00000569543 541 ntBASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 AC025062.2-201ENST00000605477 670 ntBASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 AC008667.4-201ENST00000607370 168 ntBASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CKAP2Q8WWK9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 AC073621.1-201ENST00000392730 636 ntBASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 LAGE3P1-201ENST00000425356 484 ntBASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 KRT18P27-201ENST00000427733 1299 ntBASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 FAM185BP-201ENST00000443595 716 ntBASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 NPAP1P7-201ENST00000613027 823 ntBASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CKAP2Q8WWK9 OR2I1P-210ENST00000642037 4691 ntBASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 IGHV3-65-201ENST00000523210 341 ntBASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 OR7E47P-204ENST00000575924 449 ntBASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 AL732292.2-201ENST00000609649 430 ntBASIC15.77■□□□□ 0.12
CKAP2Q8WWK9 AC093458.2-201ENST00000623150 629 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms