Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 TPM3P8-201ENST00000330554 643 ntBASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CNN2P10-201ENST00000443067 918 ntBASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 HIST2H2BB-201ENST00000449108 381 ntBASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 FGFR3P1-201ENST00000449999 601 ntBASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 DNM1P30-201ENST00000563586 452 ntBASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 AP001065.2-201ENST00000617205 644 ntBASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCDC168Q8NDH2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 ACTG1P2-201ENST00000415776 1125 ntBASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 ACTG1P11-201ENST00000425411 1125 ntBASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 AL805961.1-203ENST00000641078 1258 ntBASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC168Q8NDH2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms