Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 PHKG1P2-201ENST00000457537 863 ntBASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 AC105339.1-204ENST00000636249 355 ntBASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC83Q8IWF9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
CCDC83Q8IWF9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC83Q8IWF9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC83Q8IWF9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 FAM58DP-201ENST00000428076 619 ntBASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 EEF1DP4-201ENST00000446006 880 ntBASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC83Q8IWF9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 HNRNPUP1-201ENST00000554987 333 ntBASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms