Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RTL6Q6ICC9 MIR600HG-201ENST00000449175 5984 ntBASIC14.34□□□□□ -0.11
RTL6Q6ICC9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RTL6Q6ICC9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.33□□□□□ -0.11
RTL6Q6ICC9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
RTL6Q6ICC9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
RTL6Q6ICC9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
RTL6Q6ICC9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RTL6Q6ICC9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RTL6Q6ICC9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 FO393414.2-201ENST00000405153 598 ntBASIC14.33□□□□□ -0.12
RTL6Q6ICC9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 AC055876.2-201ENST00000531834 546 ntBASIC14.33□□□□□ -0.12
RTL6Q6ICC9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 AC007950.2-201ENST00000615045 2347 ntBASIC14.33□□□□□ -0.12
RTL6Q6ICC9 AL365203.3-201ENST00000609742 2057 ntBASIC14.33□□□□□ -0.12
RTL6Q6ICC9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 AL596257.1-201ENST00000641463 2694 ntBASIC14.33□□□□□ -0.12
RTL6Q6ICC9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RTL6Q6ICC9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AP006294.1-201ENST00000415407 339 ntBASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 POU5F1P6-201ENST00000466990 990 ntBASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AC092337.1-201ENST00000568699 1129 ntBASIC14.32□□□□□ -0.12
RTL6Q6ICC9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 AL008721.1-201ENST00000609964 604 ntBASIC14.32□□□□□ -0.12
RTL6Q6ICC9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTL6Q6ICC9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms