Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TPM3P8-201ENST00000330554 643 ntBASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 ACTG1P2-201ENST00000415776 1125 ntBASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 ACTG1P11-201ENST00000425411 1125 ntBASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 AC244157.2-201ENST00000616239 1006 ntBASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDC42BPAQ5VT25 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 AC055811.4-201ENST00000624039 1754 ntBASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 KLK3-207ENST00000595952 969 ntTSL 3 BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 AC007663.3-201ENST00000609632 465 ntBASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 AC244452.3-201ENST00000636814 210 ntBASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 AC008132.1-202ENST00000342005 1389 ntBASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDC42BPAQ5VT25 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 GCK-209ENST00000616242 2260 ntTSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 AC009090.5-201ENST00000624886 2285 ntBASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 ILF3-AS1-201ENST00000591501 1983 ntBASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPAQ5VT25 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 AC091046.1-201ENST00000331871 207 ntBASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 HNRNPA1P63-201ENST00000427917 963 ntBASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 FOS-206ENST00000555347 1280 ntTSL 2 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 AC026740.1-201ENST00000607068 791 ntBASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 AF254983.2-201ENST00000612331 135 ntBASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 AC138466.3-201ENST00000619983 221 ntBASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPAQ5VT25 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 PTPA-217ENST00000434095 870 ntTSL 2 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 FGFR3P5-201ENST00000564496 886 ntBASIC23.36■■□□□ 1.33
CDC42BPAQ5VT25 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms