Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 AC005034.1-201ENST00000426657 489 ntBASIC21.72■■□□□ 1.07
CDCA8Q53HL2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 WFDC1-204ENST00000613603 549 ntBASIC21.72■■□□□ 1.07
CDCA8Q53HL2 AL035252.4-201ENST00000624174 288 ntBASIC21.72■■□□□ 1.07
CDCA8Q53HL2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 PCDHA1-201ENST00000378133 2726 ntBASIC21.72■■□□□ 1.07
CDCA8Q53HL2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCA8Q53HL2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AL049840.4-201ENST00000602422 811 ntBASIC21.71■■□□□ 1.07
CDCA8Q53HL2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA8Q53HL2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDCA8Q53HL2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 AC134915.1-201ENST00000426461 574 ntBASIC21.7■■□□□ 1.06
CDCA8Q53HL2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 AC133539.2-201ENST00000604757 467 ntBASIC21.7■■□□□ 1.06
CDCA8Q53HL2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 INTS4P2-202ENST00000614726 2019 ntBASIC21.7■■□□□ 1.06
CDCA8Q53HL2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA8Q53HL2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.69■■□□□ 1.06
CDCA8Q53HL2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms