Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 AC021097.1-201ENST00000607902 574 ntBASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 GGTLC5P-201ENST00000617623 998 ntBASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ANKRD55Q3KP44 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 AP001282.1-201ENST00000531301 1499 ntBASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 REXO1L6P-202ENST00000619970 1078 ntBASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ANKRD55Q3KP44 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 AC117489.1-201ENST00000625169 3217 ntBASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.22□□□□□ -0.29
ANKRD55Q3KP44 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms