Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AC023824.1-201ENST00000562945 2975 ntBASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 OR6D1P-202ENST00000641007 5290 ntBASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CTC1Q2NKJ3 AL136982.4-201ENST00000437689 1740 ntBASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 CYP4F24P-201ENST00000586049 1580 ntBASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 LINC01115-203ENST00000606068 577 ntBASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 AC092384.3-202ENST00000564646 2873 ntBASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.9■□□□□ 0.3
CTC1Q2NKJ3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.89■□□□□ 0.3
CTC1Q2NKJ3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CTC1Q2NKJ3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTC1Q2NKJ3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 RHOQP1-201ENST00000555758 579 ntBASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 AL359711.2-201ENST00000563105 872 ntBASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CTC1Q2NKJ3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms