Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40BQ12829 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB40BQ12829 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40BQ12829 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40BQ12829 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40BQ12829 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40BQ12829 AP002414.3-201ENST00000589352 1468 ntBASIC14.24□□□□□ -0.13
RAB40BQ12829 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40BQ12829 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40BQ12829 AL691432.1-201ENST00000596308 1422 ntBASIC14.24□□□□□ -0.13
RAB40BQ12829 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 AC005912.2-201ENST00000619492 2400 ntBASIC14.23□□□□□ -0.13
RAB40BQ12829 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 BNIP3P1-202ENST00000550043 1585 ntBASIC14.23□□□□□ -0.13
RAB40BQ12829 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40BQ12829 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40BQ12829 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40BQ12829 RNPS1P1-201ENST00000507437 918 ntBASIC14.23□□□□□ -0.13
RAB40BQ12829 PRYP6-201ENST00000514804 343 ntBASIC14.23□□□□□ -0.13
RAB40BQ12829 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.23□□□□□ -0.13
RAB40BQ12829 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40BQ12829 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB40BQ12829 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 AL445228.2-201ENST00000605589 952 ntBASIC14.23□□□□□ -0.13
RAB40BQ12829 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB40BQ12829 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB40BQ12829 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
RAB40BQ12829 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB40BQ12829 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB40BQ12829 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB40BQ12829 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB40BQ12829 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40BQ12829 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.22□□□□□ -0.13
RAB40BQ12829 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB40BQ12829 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40BQ12829 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.22□□□□□ -0.13
RAB40BQ12829 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms