Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL16A1Q07092 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.73■□□□□ 0.91
COL16A1Q07092 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.73■□□□□ 0.91
COL16A1Q07092 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.73■□□□□ 0.91
COL16A1Q07092 AC090502.4-201ENST00000551714 1386 ntBASIC20.73■□□□□ 0.91
COL16A1Q07092 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL16A1Q07092 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
COL16A1Q07092 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC20.72■□□□□ 0.91
COL16A1Q07092 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 DDX39AP1-201ENST00000445147 1181 ntBASIC20.72■□□□□ 0.91
COL16A1Q07092 LYPLA2P1-203ENST00000447689 696 ntBASIC20.72■□□□□ 0.91
COL16A1Q07092 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 MESTP3-201ENST00000503460 968 ntBASIC20.72■□□□□ 0.91
COL16A1Q07092 ALG1L6P-201ENST00000515248 758 ntBASIC20.72■□□□□ 0.91
COL16A1Q07092 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.72■□□□□ 0.91
COL16A1Q07092 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC20.72■□□□□ 0.91
COL16A1Q07092 AL157813.1-201ENST00000612996 587 ntBASIC20.72■□□□□ 0.91
COL16A1Q07092 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.72■□□□□ 0.91
COL16A1Q07092 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL16A1Q07092 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.72■□□□□ 0.91
COL16A1Q07092 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
COL16A1Q07092 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
COL16A1Q07092 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL16A1Q07092 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL16A1Q07092 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL16A1Q07092 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL16A1Q07092 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.71■□□□□ 0.91
COL16A1Q07092 ACTBP7-201ENST00000418351 1124 ntBASIC20.71■□□□□ 0.91
COL16A1Q07092 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.71■□□□□ 0.91
COL16A1Q07092 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.71■□□□□ 0.91
COL16A1Q07092 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL16A1Q07092 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.71■□□□□ 0.91
COL16A1Q07092 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
COL16A1Q07092 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL16A1Q07092 E2F3P2-201ENST00000447755 1422 ntBASIC20.71■□□□□ 0.91
COL16A1Q07092 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.71■□□□□ 0.91
COL16A1Q07092 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL16A1Q07092 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.71■□□□□ 0.91
COL16A1Q07092 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC20.71■□□□□ 0.91
COL16A1Q07092 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC20.71■□□□□ 0.91
COL16A1Q07092 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC20.71■□□□□ 0.91
COL16A1Q07092 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL16A1Q07092 HKR1-225ENST00000592168 566 ntTSL 4 BASIC20.71■□□□□ 0.91
COL16A1Q07092 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL16A1Q07092 SHC1P1-201ENST00000425230 1745 ntBASIC20.7■□□□□ 0.9
COL16A1Q07092 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
COL16A1Q07092 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COL16A1Q07092 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.7■□□□□ 0.9
COL16A1Q07092 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.7■□□□□ 0.9
COL16A1Q07092 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL16A1Q07092 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.7■□□□□ 0.9
COL16A1Q07092 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.7■□□□□ 0.9
COL16A1Q07092 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 AC239868.1-201ENST00000369385 493 ntBASIC20.7■□□□□ 0.9
COL16A1Q07092 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC20.7■□□□□ 0.9
COL16A1Q07092 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms