Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.92■□□□□ 0.3
CDR2Q01850 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.92■□□□□ 0.3
CDR2Q01850 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.92■□□□□ 0.3
CDR2Q01850 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.92■□□□□ 0.3
CDR2Q01850 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDR2Q01850 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.92■□□□□ 0.3
CDR2Q01850 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.92■□□□□ 0.3
CDR2Q01850 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 AP006288.1-201ENST00000446065 395 ntBASIC16.92■□□□□ 0.3
CDR2Q01850 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDR2Q01850 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 AP001059.3-201ENST00000619053 235 ntBASIC16.92■□□□□ 0.3
CDR2Q01850 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CDR2Q01850 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 AC063926.3-201ENST00000624734 5658 ntBASIC16.92■□□□□ 0.3
CDR2Q01850 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
CDR2Q01850 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDR2Q01850 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.91■□□□□ 0.3
CDR2Q01850 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 AC127383.1-201ENST00000444697 1800 ntBASIC16.91■□□□□ 0.3
CDR2Q01850 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 AL035456.1-201ENST00000456064 1369 ntBASIC16.91■□□□□ 0.3
CDR2Q01850 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDR2Q01850 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.91■□□□□ 0.3
CDR2Q01850 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.91■□□□□ 0.3
CDR2Q01850 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 AC144831.1-201ENST00000573312 2656 ntBASIC16.91■□□□□ 0.3
CDR2Q01850 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 AC136604.1-201ENST00000418535 575 ntBASIC16.91■□□□□ 0.3
CDR2Q01850 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 CNN2P11-201ENST00000429351 262 ntBASIC16.91■□□□□ 0.3
CDR2Q01850 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.91■□□□□ 0.3
CDR2Q01850 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.91■□□□□ 0.3
CDR2Q01850 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.91■□□□□ 0.3
CDR2Q01850 RN7SL828P-201ENST00000607615 303 ntBASIC16.91■□□□□ 0.3
CDR2Q01850 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.91■□□□□ 0.3
CDR2Q01850 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.91■□□□□ 0.3
CDR2Q01850 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.91■□□□□ 0.3
CDR2Q01850 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CDR2Q01850 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDR2Q01850 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDR2Q01850 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.9■□□□□ 0.3
CDR2Q01850 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDR2Q01850 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDR2Q01850 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.9■□□□□ 0.3
CDR2Q01850 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.9■□□□□ 0.3
CDR2Q01850 HIST3H2BA-201ENST00000436555 524 ntBASIC16.9■□□□□ 0.3
CDR2Q01850 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.9■□□□□ 0.3
CDR2Q01850 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.9■□□□□ 0.3
CDR2Q01850 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 MIR4453-201ENST00000584019 89 ntBASIC16.9■□□□□ 0.3
CDR2Q01850 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms