Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RAE1P78406 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 AC074338.1-201ENST00000416825 156 ntBASIC15.01□□□□□ -0.01
RAE1P78406 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.01□□□□□ -0.01
RAE1P78406 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 DNAJB3-202ENST00000449667 1266 ntBASIC15.01□□□□□ -0.01
RAE1P78406 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.01□□□□□ -0.01
RAE1P78406 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 HLA-J-203ENST00000494367 1087 ntBASIC15.01□□□□□ -0.01
RAE1P78406 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.01□□□□□ -0.01
RAE1P78406 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 AC069262.1-201ENST00000539058 672 ntBASIC15.01□□□□□ -0.01
RAE1P78406 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.01□□□□□ -0.01
RAE1P78406 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.01□□□□□ -0.01
RAE1P78406 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.01□□□□□ -0.01
RAE1P78406 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RAE1P78406 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.01□□□□□ -0.01
RAE1P78406 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RAE1P78406 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAE1P78406 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15□□□□□ -0.01
RAE1P78406 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15□□□□□ -0.01
RAE1P78406 AC023824.1-201ENST00000562945 2975 ntBASIC15□□□□□ -0.01
RAE1P78406 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RAE1P78406 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RAE1P78406 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15□□□□□ -0.01
RAE1P78406 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAE1P78406 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RAE1P78406 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15□□□□□ -0.01
RAE1P78406 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15□□□□□ -0.01
RAE1P78406 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15□□□□□ -0.01
RAE1P78406 RPL37AP1-201ENST00000412502 279 ntBASIC15□□□□□ -0.01
RAE1P78406 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15□□□□□ -0.01
RAE1P78406 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
RAE1P78406 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RAE1P78406 SNHG9-202ENST00000564014 471 ntBASIC15□□□□□ -0.01
RAE1P78406 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15□□□□□ -0.01
RAE1P78406 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15□□□□□ -0.01
RAE1P78406 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15□□□□□ -0.01
RAE1P78406 AL589739.1-201ENST00000607720 493 ntBASIC15□□□□□ -0.01
RAE1P78406 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15□□□□□ -0.01
RAE1P78406 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15□□□□□ -0.01
RAE1P78406 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RAE1P78406 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 AC126365.1-201ENST00000578585 1514 ntBASIC15□□□□□ -0.01
RAE1P78406 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15□□□□□ -0.01
RAE1P78406 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15□□□□□ -0.01
RAE1P78406 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RAE1P78406 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RAE1P78406 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms