Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ASIC1P78348 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.72■□□□□ 0.43
ASIC1P78348 AZGP1P1-201ENST00000411909 902 ntBASIC17.72■□□□□ 0.43
ASIC1P78348 DNAJB3-202ENST00000449667 1266 ntBASIC17.72■□□□□ 0.43
ASIC1P78348 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.72■□□□□ 0.43
ASIC1P78348 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.72■□□□□ 0.43
ASIC1P78348 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 AC013268.4-201ENST00000637413 2228 ntBASIC17.72■□□□□ 0.43
ASIC1P78348 AC104640.1-201ENST00000562617 2109 ntBASIC17.72■□□□□ 0.43
ASIC1P78348 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 AC144831.1-201ENST00000573312 2656 ntBASIC17.72■□□□□ 0.43
ASIC1P78348 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.72■□□□□ 0.43
ASIC1P78348 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.72■□□□□ 0.43
ASIC1P78348 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ASIC1P78348 AC105250.1-201ENST00000509378 2057 ntBASIC17.71■□□□□ 0.43
ASIC1P78348 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ASIC1P78348 AC087481.3-201ENST00000602886 1894 ntBASIC17.71■□□□□ 0.43
ASIC1P78348 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
ASIC1P78348 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.71■□□□□ 0.43
ASIC1P78348 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.71■□□□□ 0.43
ASIC1P78348 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
ASIC1P78348 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
ASIC1P78348 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.71■□□□□ 0.43
ASIC1P78348 RN7SL828P-201ENST00000607615 303 ntBASIC17.71■□□□□ 0.43
ASIC1P78348 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.71■□□□□ 0.43
ASIC1P78348 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.71■□□□□ 0.43
ASIC1P78348 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ASIC1P78348 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.71■□□□□ 0.43
ASIC1P78348 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ASIC1P78348 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.71■□□□□ 0.43
ASIC1P78348 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ASIC1P78348 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
ASIC1P78348 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ASIC1P78348 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.71■□□□□ 0.42
ASIC1P78348 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ASIC1P78348 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ASIC1P78348 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ASIC1P78348 AC022532.1-201ENST00000624563 1728 ntBASIC17.7■□□□□ 0.42
ASIC1P78348 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.7■□□□□ 0.42
ASIC1P78348 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.7■□□□□ 0.42
ASIC1P78348 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.7■□□□□ 0.42
ASIC1P78348 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ASIC1P78348 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.7■□□□□ 0.42
ASIC1P78348 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ASIC1P78348 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.7■□□□□ 0.42
ASIC1P78348 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.7■□□□□ 0.42
ASIC1P78348 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ASIC1P78348 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ASIC1P78348 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.7■□□□□ 0.42
ASIC1P78348 SPDYE7P-202ENST00000420373 878 ntBASIC17.7■□□□□ 0.42
ASIC1P78348 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.7■□□□□ 0.42
ASIC1P78348 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.7■□□□□ 0.42
ASIC1P78348 HNRNPUP1-201ENST00000554987 333 ntBASIC17.7■□□□□ 0.42
ASIC1P78348 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ASIC1P78348 AL133215.2-201ENST00000609242 977 ntBASIC17.7■□□□□ 0.42
ASIC1P78348 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ASIC1P78348 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ASIC1P78348 LINC00628-201ENST00000628516 1289 ntBASIC17.7■□□□□ 0.42
ASIC1P78348 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ASIC1P78348 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ASIC1P78348 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.7■□□□□ 0.42
ASIC1P78348 AC009090.5-201ENST00000624886 2285 ntBASIC17.7■□□□□ 0.42
ASIC1P78348 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms