Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TPM4P67936 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TPM4P67936 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TPM4P67936 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.84■□□□□ 0.45
TPM4P67936 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.84■□□□□ 0.45
TPM4P67936 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.84■□□□□ 0.45
TPM4P67936 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.84■□□□□ 0.45
TPM4P67936 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.84■□□□□ 0.45
TPM4P67936 AC109635.5-201ENST00000533593 962 ntBASIC17.84■□□□□ 0.45
TPM4P67936 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.84■□□□□ 0.45
TPM4P67936 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.84■□□□□ 0.45
TPM4P67936 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 CLEC4GP1-201ENST00000596555 870 ntBASIC17.84■□□□□ 0.45
TPM4P67936 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TPM4P67936 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TPM4P67936 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TPM4P67936 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TPM4P67936 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TPM4P67936 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TPM4P67936 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 RPS2P28-201ENST00000314255 741 ntBASIC17.83■□□□□ 0.44
TPM4P67936 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TPM4P67936 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TPM4P67936 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM4P67936 PRSS29P-201ENST00000440800 595 ntBASIC17.83■□□□□ 0.44
TPM4P67936 HCG4P8-203ENST00000443049 980 ntBASIC17.83■□□□□ 0.44
TPM4P67936 MIR4751-201ENST00000578027 74 ntBASIC17.83■□□□□ 0.44
TPM4P67936 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TPM4P67936 AL078644.1-201ENST00000609881 752 ntBASIC17.83■□□□□ 0.44
TPM4P67936 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM4P67936 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM4P67936 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TPM4P67936 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TPM4P67936 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM4P67936 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TPM4P67936 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM4P67936 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TPM4P67936 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TPM4P67936 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TPM4P67936 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM4P67936 CICP24-201ENST00000605464 2705 ntBASIC17.82■□□□□ 0.44
TPM4P67936 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM4P67936 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.82■□□□□ 0.44
TPM4P67936 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.82■□□□□ 0.44
TPM4P67936 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM4P67936 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM4P67936 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms