Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
SUMO3P55854 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 AL133267.1-201ENST00000398220 340 ntBASIC14.32□□□□□ -0.12
SUMO3P55854 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.32□□□□□ -0.12
SUMO3P55854 TOMM22P5-201ENST00000416399 439 ntBASIC14.32□□□□□ -0.12
SUMO3P55854 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.32□□□□□ -0.12
SUMO3P55854 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.32□□□□□ -0.12
SUMO3P55854 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.32□□□□□ -0.12
SUMO3P55854 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 AC027796.2-201ENST00000575326 344 ntBASIC14.32□□□□□ -0.12
SUMO3P55854 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.32□□□□□ -0.12
SUMO3P55854 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.32□□□□□ -0.12
SUMO3P55854 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 AC105250.1-201ENST00000509378 2057 ntBASIC14.32□□□□□ -0.12
SUMO3P55854 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
SUMO3P55854 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.32□□□□□ -0.12
SUMO3P55854 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SUMO3P55854 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SUMO3P55854 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SUMO3P55854 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 RPL5P21-201ENST00000404620 815 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.31□□□□□ -0.12
SUMO3P55854 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.31□□□□□ -0.12
SUMO3P55854 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.31□□□□□ -0.12
SUMO3P55854 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 TIMM17BP1-201ENST00000545713 516 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SUMO3P55854 AC009407.1-201ENST00000568958 598 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
SUMO3P55854 TMBIM7P-203ENST00000641617 1718 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SUMO3P55854 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SUMO3P55854 CICP13-201ENST00000422015 2789 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SUMO3P55854 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.31□□□□□ -0.12
SUMO3P55854 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 AC138969.3-201ENST00000546612 1459 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 AC138932.2-201ENST00000548268 1459 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 AC126755.4-201ENST00000549796 1459 ntBASIC14.31□□□□□ -0.12
SUMO3P55854 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SUMO3P55854 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SUMO3P55854 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SUMO3P55854 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
SUMO3P55854 MIR770-201ENST00000390219 98 ntBASIC14.3□□□□□ -0.12
SUMO3P55854 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms