Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.48□□□□□ -0.09
CENPAP49450 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 AC011477.6-201ENST00000604980 1927 ntBASIC14.48□□□□□ -0.09
CENPAP49450 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.48□□□□□ -0.09
CENPAP49450 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CENPAP49450 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CENPAP49450 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CENPAP49450 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 ZNF259P1-201ENST00000407656 1365 ntBASIC14.47□□□□□ -0.09
CENPAP49450 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.47□□□□□ -0.09
CENPAP49450 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 PMS2P7-201ENST00000506558 1336 ntBASIC14.47□□□□□ -0.09
CENPAP49450 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CENPAP49450 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 KRT18P2-201ENST00000447938 1258 ntBASIC14.47□□□□□ -0.09
CENPAP49450 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.47□□□□□ -0.09
CENPAP49450 AC034105.1-201ENST00000563488 319 ntBASIC14.47□□□□□ -0.09
CENPAP49450 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.47□□□□□ -0.09
CENPAP49450 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CENPAP49450 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.47□□□□□ -0.09
CENPAP49450 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.47□□□□□ -0.09
CENPAP49450 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
CENPAP49450 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 IL9RP2-201ENST00000423948 1312 ntBASIC14.46□□□□□ -0.09
CENPAP49450 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CENPAP49450 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CENPAP49450 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.46□□□□□ -0.09
CENPAP49450 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.46□□□□□ -0.09
CENPAP49450 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CENPAP49450 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.46□□□□□ -0.09
CENPAP49450 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.46□□□□□ -0.09
CENPAP49450 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.46□□□□□ -0.09
CENPAP49450 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CENPAP49450 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.46□□□□□ -0.09
CENPAP49450 AL161645.1-201ENST00000622716 1255 ntBASIC14.46□□□□□ -0.09
CENPAP49450 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CENPAP49450 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CENPAP49450 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CENPAP49450 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.46□□□□□ -0.1
CENPAP49450 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CENPAP49450 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms