Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 AC144831.1-201ENST00000573312 2656 ntBASIC15.27■□□□□ 0.03
SLC6A12P48065 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC6A12P48065 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 KRT8P44-201ENST00000441609 1350 ntBASIC15.26■□□□□ 0.03
SLC6A12P48065 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC6A12P48065 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC6A12P48065 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 AC107890.1-201ENST00000422478 521 ntBASIC15.26■□□□□ 0.03
SLC6A12P48065 AC067863.1-201ENST00000494933 530 ntBASIC15.26■□□□□ 0.03
SLC6A12P48065 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC6A12P48065 AC069120.2-201ENST00000524091 540 ntBASIC15.26■□□□□ 0.03
SLC6A12P48065 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC6A12P48065 AC010336.2-201ENST00000564226 506 ntBASIC15.26■□□□□ 0.03
SLC6A12P48065 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.26■□□□□ 0.03
SLC6A12P48065 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC6A12P48065 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC6A12P48065 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC6A12P48065 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC6A12P48065 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC6A12P48065 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SLC6A12P48065 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLC6A12P48065 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC6A12P48065 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 AC092580.3-201ENST00000430932 139 ntBASIC15.25■□□□□ 0.03
SLC6A12P48065 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC6A12P48065 SLED1-202ENST00000512051 380 ntBASIC15.25■□□□□ 0.03
SLC6A12P48065 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC6A12P48065 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC6A12P48065 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC6A12P48065 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC6A12P48065 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC6A12P48065 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC6A12P48065 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC6A12P48065 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC6A12P48065 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC6A12P48065 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms