Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
BRCC3P46736 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCC3P46736 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCC3P46736 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCC3P46736 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.79■□□□□ 0.28
BRCC3P46736 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCC3P46736 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCC3P46736 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCC3P46736 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRCC3P46736 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCC3P46736 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.79■□□□□ 0.28
BRCC3P46736 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRCC3P46736 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BRCC3P46736 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.78■□□□□ 0.28
BRCC3P46736 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BRCC3P46736 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.78■□□□□ 0.28
BRCC3P46736 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.78■□□□□ 0.28
BRCC3P46736 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.78■□□□□ 0.28
BRCC3P46736 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 AL162726.2-201ENST00000438986 1017 ntBASIC16.78■□□□□ 0.28
BRCC3P46736 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 KRT18P43-201ENST00000469825 1281 ntBASIC16.78■□□□□ 0.28
BRCC3P46736 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.78■□□□□ 0.28
BRCC3P46736 USP32P1-208ENST00000506594 1164 ntBASIC16.78■□□□□ 0.28
BRCC3P46736 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BRCC3P46736 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.78■□□□□ 0.28
BRCC3P46736 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.78■□□□□ 0.28
BRCC3P46736 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.78■□□□□ 0.28
BRCC3P46736 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.78■□□□□ 0.28
BRCC3P46736 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.78■□□□□ 0.28
BRCC3P46736 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.78■□□□□ 0.28
BRCC3P46736 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.78■□□□□ 0.28
BRCC3P46736 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
BRCC3P46736 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BRCC3P46736 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BRCC3P46736 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.77■□□□□ 0.28
BRCC3P46736 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.77■□□□□ 0.28
BRCC3P46736 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.77■□□□□ 0.28
BRCC3P46736 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
BRCC3P46736 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.77■□□□□ 0.28
BRCC3P46736 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BRCC3P46736 MIR1909-201ENST00000411312 80 ntBASIC16.77■□□□□ 0.28
BRCC3P46736 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.77■□□□□ 0.28
BRCC3P46736 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.77■□□□□ 0.28
BRCC3P46736 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.77■□□□□ 0.28
BRCC3P46736 AC120045.2-201ENST00000567334 178 ntBASIC16.77■□□□□ 0.28
BRCC3P46736 MIR5189-201ENST00000577370 114 ntBASIC16.77■□□□□ 0.28
BRCC3P46736 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.77■□□□□ 0.28
BRCC3P46736 AC015936.2-201ENST00000593177 259 ntBASIC16.77■□□□□ 0.28
BRCC3P46736 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.77■□□□□ 0.28
BRCC3P46736 AC000095.1-201ENST00000603208 874 ntBASIC16.77■□□□□ 0.28
BRCC3P46736 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRCC3P46736 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRCC3P46736 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRCC3P46736 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.77■□□□□ 0.27
BRCC3P46736 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.77■□□□□ 0.27
BRCC3P46736 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
BRCC3P46736 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRCC3P46736 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
BRCC3P46736 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.77■□□□□ 0.27
BRCC3P46736 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.77■□□□□ 0.27
BRCC3P46736 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BRCC3P46736 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.76■□□□□ 0.27
BRCC3P46736 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
BRCC3P46736 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 AC024909.3-201ENST00000611513 2257 ntBASIC16.76■□□□□ 0.27
BRCC3P46736 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
BRCC3P46736 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 AC112504.1-201ENST00000623415 1841 ntBASIC16.76■□□□□ 0.27
BRCC3P46736 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 MIR658-201ENST00000385210 100 ntBASIC16.76■□□□□ 0.27
BRCC3P46736 C1QBPP1-201ENST00000400117 770 ntBASIC16.76■□□□□ 0.27
BRCC3P46736 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BRCC3P46736 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BRCC3P46736 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.76■□□□□ 0.27
BRCC3P46736 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.76■□□□□ 0.27
BRCC3P46736 AC022210.1-201ENST00000449856 793 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms