Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP13P45452 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
MMP13P45452 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.53■□□□□ 0.24
MMP13P45452 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.53■□□□□ 0.24
MMP13P45452 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MMP13P45452 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP13P45452 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP13P45452 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.52■□□□□ 0.24
MMP13P45452 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP13P45452 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP13P45452 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MMP13P45452 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP13P45452 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP13P45452 GPS2P2-201ENST00000430745 888 ntBASIC16.52■□□□□ 0.24
MMP13P45452 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.52■□□□□ 0.24
MMP13P45452 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP13P45452 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP13P45452 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP13P45452 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.52■□□□□ 0.24
MMP13P45452 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.52■□□□□ 0.24
MMP13P45452 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MMP13P45452 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.52■□□□□ 0.24
MMP13P45452 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 LINC01101-201ENST00000622953 1884 ntBASIC16.52■□□□□ 0.23
MMP13P45452 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.52■□□□□ 0.23
MMP13P45452 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MMP13P45452 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 TCAF2P1-201ENST00000291129 2421 ntBASIC16.51■□□□□ 0.23
MMP13P45452 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 AC087481.3-201ENST00000602886 1894 ntBASIC16.51■□□□□ 0.23
MMP13P45452 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
MMP13P45452 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP13P45452 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
MMP13P45452 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP13P45452 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.51■□□□□ 0.23
MMP13P45452 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.51■□□□□ 0.23
MMP13P45452 AP001160.2-201ENST00000596071 487 ntBASIC16.51■□□□□ 0.23
MMP13P45452 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MMP13P45452 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.51■□□□□ 0.23
MMP13P45452 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MMP13P45452 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MMP13P45452 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MMP13P45452 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.5■□□□□ 0.23
MMP13P45452 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP13P45452 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms