Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HNF4AP41235 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.44■□□□□ 0.06
HNF4AP41235 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.44■□□□□ 0.06
HNF4AP41235 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.44■□□□□ 0.06
HNF4AP41235 SPDYE14P-201ENST00000442619 822 ntBASIC15.44■□□□□ 0.06
HNF4AP41235 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.44■□□□□ 0.06
HNF4AP41235 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.44■□□□□ 0.06
HNF4AP41235 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.44■□□□□ 0.06
HNF4AP41235 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.44■□□□□ 0.06
HNF4AP41235 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
HNF4AP41235 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HNF4AP41235 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HNF4AP41235 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HNF4AP41235 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.44■□□□□ 0.06
HNF4AP41235 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HNF4AP41235 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HNF4AP41235 REXO1L1P-202ENST00000608646 1974 ntBASIC15.44■□□□□ 0.06
HNF4AP41235 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.43■□□□□ 0.06
HNF4AP41235 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.43■□□□□ 0.06
HNF4AP41235 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
HNF4AP41235 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.43■□□□□ 0.06
HNF4AP41235 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HNF4AP41235 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.43■□□□□ 0.06
HNF4AP41235 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.43■□□□□ 0.06
HNF4AP41235 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.43■□□□□ 0.06
HNF4AP41235 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.43■□□□□ 0.06
HNF4AP41235 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.43■□□□□ 0.06
HNF4AP41235 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
HNF4AP41235 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.43■□□□□ 0.06
HNF4AP41235 AC018529.1-201ENST00000613063 361 ntBASIC15.43■□□□□ 0.06
HNF4AP41235 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.43■□□□□ 0.06
HNF4AP41235 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 CYP4F24P-201ENST00000586049 1580 ntBASIC15.43■□□□□ 0.06
HNF4AP41235 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.43■□□□□ 0.06
HNF4AP41235 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HNF4AP41235 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.42■□□□□ 0.06
HNF4AP41235 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.42■□□□□ 0.06
HNF4AP41235 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.42■□□□□ 0.06
HNF4AP41235 AL353705.2-201ENST00000428243 662 ntBASIC15.42■□□□□ 0.06
HNF4AP41235 METTL21AP1-201ENST00000438852 635 ntBASIC15.42■□□□□ 0.06
HNF4AP41235 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HNF4AP41235 EEF1DP4-201ENST00000446006 880 ntBASIC15.42■□□□□ 0.06
HNF4AP41235 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.42■□□□□ 0.06
HNF4AP41235 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.42■□□□□ 0.06
HNF4AP41235 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.42■□□□□ 0.06
HNF4AP41235 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.42■□□□□ 0.06
HNF4AP41235 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.42■□□□□ 0.06
HNF4AP41235 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.42■□□□□ 0.06
HNF4AP41235 MIR4453-201ENST00000584019 89 ntBASIC15.42■□□□□ 0.06
HNF4AP41235 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.42■□□□□ 0.06
HNF4AP41235 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HNF4AP41235 AC093028.1-201ENST00000622998 982 ntBASIC15.42■□□□□ 0.06
HNF4AP41235 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
HNF4AP41235 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.42■□□□□ 0.06
HNF4AP41235 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms