Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT20P35900 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 AC105233.2-201ENST00000523697 349 ntBASIC15.17■□□□□ 0.02
KRT20P35900 AF228730.5-201ENST00000530288 346 ntBASIC15.17■□□□□ 0.02
KRT20P35900 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.17■□□□□ 0.02
KRT20P35900 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.17■□□□□ 0.02
KRT20P35900 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.17■□□□□ 0.02
KRT20P35900 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.17■□□□□ 0.02
KRT20P35900 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT20P35900 AC008267.7-201ENST00000624570 1194 ntBASIC15.17■□□□□ 0.02
KRT20P35900 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
KRT20P35900 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT20P35900 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.17■□□□□ 0.02
KRT20P35900 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRT20P35900 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.17■□□□□ 0.02
KRT20P35900 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
KRT20P35900 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
KRT20P35900 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.16■□□□□ 0.02
KRT20P35900 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
KRT20P35900 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
KRT20P35900 AL592309.1-201ENST00000443127 649 ntBASIC15.16■□□□□ 0.02
KRT20P35900 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 AC079140.1-201ENST00000508039 487 ntBASIC15.16■□□□□ 0.02
KRT20P35900 YBX1P5-201ENST00000509441 847 ntBASIC15.16■□□□□ 0.02
KRT20P35900 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT20P35900 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT20P35900 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 AC027307.2-201ENST00000591252 911 ntBASIC15.16■□□□□ 0.02
KRT20P35900 AC023511.2-201ENST00000618803 211 ntBASIC15.16■□□□□ 0.02
KRT20P35900 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT20P35900 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
KRT20P35900 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT20P35900 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT20P35900 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT20P35900 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT20P35900 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT20P35900 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KRT20P35900 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
KRT20P35900 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT20P35900 AC005237.2-201ENST00000434368 219 ntBASIC15.15■□□□□ 0.02
KRT20P35900 AC093724.1-201ENST00000448659 1027 ntBASIC15.15■□□□□ 0.02
KRT20P35900 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT20P35900 AP000344.2-201ENST00000512987 629 ntBASIC15.15■□□□□ 0.02
KRT20P35900 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
KRT20P35900 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT20P35900 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT20P35900 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT20P35900 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT20P35900 KRT8P23-201ENST00000560090 1207 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms