Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC6A4P31645 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A4P31645 NME2P1-201ENST00000426182 414 ntBASIC16.2■□□□□ 0.18
SLC6A4P31645 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC6A4P31645 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC6A4P31645 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC6A4P31645 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A4P31645 AC036164.1-201ENST00000570544 333 ntBASIC16.2■□□□□ 0.18
SLC6A4P31645 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.2■□□□□ 0.18
SLC6A4P31645 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SLC6A4P31645 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC6A4P31645 AL358472.5-202ENST00000641448 1267 ntBASIC16.2■□□□□ 0.18
SLC6A4P31645 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A4P31645 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC6A4P31645 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC6A4P31645 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC6A4P31645 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A4P31645 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC6A4P31645 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SLC6A4P31645 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC6A4P31645 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 PRAL-201ENST00000624952 3286 ntBASIC16.19■□□□□ 0.18
SLC6A4P31645 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A4P31645 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A4P31645 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC6A4P31645 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC6A4P31645 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC6A4P31645 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC6A4P31645 GAPDHP21-201ENST00000450301 1010 ntBASIC16.19■□□□□ 0.18
SLC6A4P31645 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC6A4P31645 FAM86LP-201ENST00000478302 853 ntBASIC16.19■□□□□ 0.18
SLC6A4P31645 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
SLC6A4P31645 TMEM261P1-201ENST00000604899 340 ntBASIC16.19■□□□□ 0.18
SLC6A4P31645 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
SLC6A4P31645 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SLC6A4P31645 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A4P31645 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC6A4P31645 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC6A4P31645 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC6A4P31645 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC6A4P31645 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
SLC6A4P31645 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SLC6A4P31645 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SLC6A4P31645 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC6A4P31645 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC6A4P31645 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
SLC6A4P31645 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC6A4P31645 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC6A4P31645 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SLC6A4P31645 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC6A4P31645 AC092552.1-201ENST00000547243 906 ntBASIC16.18■□□□□ 0.18
SLC6A4P31645 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC6A4P31645 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC6A4P31645 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC6A4P31645 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms