Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TNFSF4P23510 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.62□□□□□ -0.23
TNFSF4P23510 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.61□□□□□ -0.23
TNFSF4P23510 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.61□□□□□ -0.23
TNFSF4P23510 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.61□□□□□ -0.23
TNFSF4P23510 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.61□□□□□ -0.23
TNFSF4P23510 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.61□□□□□ -0.23
TNFSF4P23510 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.61□□□□□ -0.23
TNFSF4P23510 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.61□□□□□ -0.23
TNFSF4P23510 TEX28P1-201ENST00000613479 1221 ntBASIC13.61□□□□□ -0.23
TNFSF4P23510 TEX28P2-201ENST00000617764 1221 ntBASIC13.61□□□□□ -0.23
TNFSF4P23510 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 AC100757.3-201ENST00000622361 1406 ntBASIC13.61□□□□□ -0.23
TNFSF4P23510 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.61□□□□□ -0.23
TNFSF4P23510 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TNFSF4P23510 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TNFSF4P23510 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TNFSF4P23510 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.6□□□□□ -0.23
TNFSF4P23510 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.6□□□□□ -0.23
TNFSF4P23510 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TNFSF4P23510 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 RPL37AP1-201ENST00000412502 279 ntBASIC13.6□□□□□ -0.23
TNFSF4P23510 AL080243.2-201ENST00000418783 582 ntBASIC13.6□□□□□ -0.23
TNFSF4P23510 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 AL513523.2-202ENST00000427283 2040 ntBASIC13.6□□□□□ -0.23
TNFSF4P23510 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
TNFSF4P23510 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.6□□□□□ -0.23
TNFSF4P23510 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.6□□□□□ -0.23
TNFSF4P23510 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TNFSF4P23510 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TNFSF4P23510 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.6□□□□□ -0.23
TNFSF4P23510 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.6□□□□□ -0.23
TNFSF4P23510 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.6□□□□□ -0.23
TNFSF4P23510 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.6□□□□□ -0.23
TNFSF4P23510 AL355385.1-201ENST00000606123 409 ntBASIC13.6□□□□□ -0.23
TNFSF4P23510 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.6□□□□□ -0.23
TNFSF4P23510 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms