Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX1P22670 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX1P22670 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.27■□□□□ 0.36
RFX1P22670 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RFX1P22670 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFX1P22670 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RFX1P22670 AC092580.3-201ENST00000430932 139 ntBASIC17.27■□□□□ 0.36
RFX1P22670 AL139010.1-201ENST00000454878 894 ntBASIC17.27■□□□□ 0.36
RFX1P22670 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.27■□□□□ 0.36
RFX1P22670 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 AC003101.2-201ENST00000612557 442 ntBASIC17.27■□□□□ 0.36
RFX1P22670 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX1P22670 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RFX1P22670 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX1P22670 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.27■□□□□ 0.35
RFX1P22670 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX1P22670 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.27■□□□□ 0.35
RFX1P22670 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX1P22670 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX1P22670 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RFX1P22670 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX1P22670 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX1P22670 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFX1P22670 AC126177.1-201ENST00000547829 2218 ntBASIC17.27■□□□□ 0.35
RFX1P22670 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX1P22670 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RFX1P22670 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX1P22670 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RFX1P22670 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.26■□□□□ 0.35
RFX1P22670 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX1P22670 AC004890.2-204ENST00000481968 304 ntBASIC17.26■□□□□ 0.35
RFX1P22670 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RFX1P22670 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.26■□□□□ 0.35
RFX1P22670 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX1P22670 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
RFX1P22670 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX1P22670 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX1P22670 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFX1P22670 AC100757.3-201ENST00000622361 1406 ntBASIC17.26■□□□□ 0.35
RFX1P22670 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 PRAL-201ENST00000624952 3286 ntBASIC17.26■□□□□ 0.35
RFX1P22670 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.26■□□□□ 0.35
RFX1P22670 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RFX1P22670 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.26■□□□□ 0.35
RFX1P22670 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 REXO1L1P-202ENST00000608646 1974 ntBASIC17.26■□□□□ 0.35
RFX1P22670 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFX1P22670 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX1P22670 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
RFX1P22670 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 TMBIM7P-203ENST00000641617 1718 ntBASIC17.25■□□□□ 0.35
RFX1P22670 AC022144.1-201ENST00000602255 1580 ntBASIC17.25■□□□□ 0.35
RFX1P22670 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RFX1P22670 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX1P22670 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RFX1P22670 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX1P22670 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.25■□□□□ 0.35
RFX1P22670 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX1P22670 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX1P22670 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.25■□□□□ 0.35
RFX1P22670 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX1P22670 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX1P22670 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFX1P22670 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.25■□□□□ 0.35
RFX1P22670 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX1P22670 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX1P22670 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms