Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BRAFP15056 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 RNU1-129P-201ENST00000384064 167 ntBASIC16.38■□□□□ 0.21
BRAFP15056 AC002056.1-201ENST00000395613 760 ntBASIC16.38■□□□□ 0.21
BRAFP15056 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.38■□□□□ 0.21
BRAFP15056 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.38■□□□□ 0.21
BRAFP15056 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.38■□□□□ 0.21
BRAFP15056 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.38■□□□□ 0.21
BRAFP15056 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 U1.21-201ENST00000580816 167 ntBASIC16.38■□□□□ 0.21
BRAFP15056 AL009183.1-201ENST00000603760 355 ntBASIC16.38■□□□□ 0.21
BRAFP15056 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.38■□□□□ 0.21
BRAFP15056 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
BRAFP15056 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 TCAF2P1-201ENST00000291129 2421 ntBASIC16.38■□□□□ 0.21
BRAFP15056 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
BRAFP15056 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.38■□□□□ 0.21
BRAFP15056 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BRAFP15056 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BRAFP15056 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.37■□□□□ 0.21
BRAFP15056 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.37■□□□□ 0.21
BRAFP15056 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 AC023908.3-201ENST00000564211 3047 ntBASIC16.37■□□□□ 0.21
BRAFP15056 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.37■□□□□ 0.21
BRAFP15056 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.37■□□□□ 0.21
BRAFP15056 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 AC092183.1-201ENST00000469884 875 ntBASIC16.37■□□□□ 0.21
BRAFP15056 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
BRAFP15056 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.37■□□□□ 0.21
BRAFP15056 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.37■□□□□ 0.21
BRAFP15056 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
BRAFP15056 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
BRAFP15056 AL596442.2-201ENST00000610240 980 ntBASIC16.37■□□□□ 0.21
BRAFP15056 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.37■□□□□ 0.21
BRAFP15056 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
BRAFP15056 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.37■□□□□ 0.21
BRAFP15056 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.37■□□□□ 0.21
BRAFP15056 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
BRAFP15056 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
BRAFP15056 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.37■□□□□ 0.21
BRAFP15056 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BRAFP15056 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
BRAFP15056 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.36■□□□□ 0.21
BRAFP15056 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
BRAFP15056 AL355306.1-201ENST00000415580 579 ntBASIC16.36■□□□□ 0.21
BRAFP15056 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BRAFP15056 AC109635.5-201ENST00000533593 962 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms