Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RB1P06400 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RB1P06400 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RB1P06400 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.62■□□□□ 0.25
RB1P06400 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.62■□□□□ 0.25
RB1P06400 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.62■□□□□ 0.25
RB1P06400 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.62■□□□□ 0.25
RB1P06400 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 AC079328.1-201ENST00000560358 952 ntBASIC16.62■□□□□ 0.25
RB1P06400 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.62■□□□□ 0.25
RB1P06400 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.62■□□□□ 0.25
RB1P06400 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RB1P06400 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
RB1P06400 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.62■□□□□ 0.25
RB1P06400 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RB1P06400 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
RB1P06400 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.62■□□□□ 0.25
RB1P06400 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RB1P06400 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.61■□□□□ 0.25
RB1P06400 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RB1P06400 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RB1P06400 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.61■□□□□ 0.25
RB1P06400 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RB1P06400 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RB1P06400 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.61■□□□□ 0.25
RB1P06400 POM121L10P-201ENST00000436994 1285 ntBASIC16.61■□□□□ 0.25
RB1P06400 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.61■□□□□ 0.25
RB1P06400 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.61■□□□□ 0.25
RB1P06400 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.61■□□□□ 0.25
RB1P06400 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.61■□□□□ 0.25
RB1P06400 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.61■□□□□ 0.25
RB1P06400 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RB1P06400 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.61■□□□□ 0.25
RB1P06400 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.61■□□□□ 0.25
RB1P06400 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RB1P06400 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RB1P06400 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RB1P06400 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.6■□□□□ 0.25
RB1P06400 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RB1P06400 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.6■□□□□ 0.25
RB1P06400 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.6■□□□□ 0.25
RB1P06400 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.6■□□□□ 0.25
RB1P06400 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.6■□□□□ 0.25
RB1P06400 AC114812.1-204ENST00000449669 728 ntBASIC16.6■□□□□ 0.25
RB1P06400 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.6■□□□□ 0.25
RB1P06400 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.6■□□□□ 0.25
RB1P06400 RN7SL48P-201ENST00000579283 293 ntBASIC16.6■□□□□ 0.25
RB1P06400 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RB1P06400 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RB1P06400 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RB1P06400 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms