Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 SPDYE21P-201ENST00000413323 827 ntBASIC14.23□□□□□ -0.13
APOA1P02647 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.23□□□□□ -0.13
APOA1P02647 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 ATP5G1P1-201ENST00000448724 379 ntBASIC14.23□□□□□ -0.13
APOA1P02647 YBX1P2-201ENST00000489612 999 ntBASIC14.23□□□□□ -0.13
APOA1P02647 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.23□□□□□ -0.13
APOA1P02647 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.23□□□□□ -0.13
APOA1P02647 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
APOA1P02647 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.23□□□□□ -0.13
APOA1P02647 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.23□□□□□ -0.13
APOA1P02647 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
APOA1P02647 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 AL590787.1-201ENST00000568856 1315 ntBASIC14.22□□□□□ -0.13
APOA1P02647 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 AL592424.1-201ENST00000563624 1536 ntBASIC14.22□□□□□ -0.13
APOA1P02647 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APOA1P02647 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
APOA1P02647 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
APOA1P02647 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 HOMER2P1-201ENST00000455653 964 ntBASIC14.22□□□□□ -0.13
APOA1P02647 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.22□□□□□ -0.13
APOA1P02647 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 AC020765.3-201ENST00000613051 740 ntBASIC14.22□□□□□ -0.13
APOA1P02647 IGHV3-41-201ENST00000613121 348 ntBASIC14.22□□□□□ -0.13
APOA1P02647 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
APOA1P02647 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APOA1P02647 HYMAI.1-201ENST00000620949 238 ntBASIC14.22□□□□□ -0.13
APOA1P02647 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA1P02647 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.22□□□□□ -0.13
APOA1P02647 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
APOA1P02647 AJ011931.1-201ENST00000618749 2492 ntBASIC14.22□□□□□ -0.13
APOA1P02647 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOA1P02647 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOA1P02647 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA1P02647 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms