Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AHCYP2-201ENST00000430630 1300 ntBASIC14.31□□□□□ -0.12
SPTA1P02549 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTA1P02549 AC079178.1-201ENST00000420915 656 ntBASIC14.31□□□□□ -0.12
SPTA1P02549 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTA1P02549 AC078819.1-201ENST00000547454 765 ntBASIC14.31□□□□□ -0.12
SPTA1P02549 AC012085.1-201ENST00000548270 765 ntBASIC14.31□□□□□ -0.12
SPTA1P02549 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTA1P02549 AC025279.2-201ENST00000569730 653 ntBASIC14.31□□□□□ -0.12
SPTA1P02549 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTA1P02549 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTA1P02549 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.31□□□□□ -0.12
SPTA1P02549 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.31□□□□□ -0.12
SPTA1P02549 AC093813.1-201ENST00000605066 256 ntBASIC14.31□□□□□ -0.12
SPTA1P02549 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.31□□□□□ -0.12
SPTA1P02549 UBALD1-205ENST00000590891 2641 ntBASIC14.31□□□□□ -0.12
SPTA1P02549 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.31□□□□□ -0.12
SPTA1P02549 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SPTA1P02549 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 AL121723.1-201ENST00000445194 1519 ntBASIC14.3□□□□□ -0.12
SPTA1P02549 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTA1P02549 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SPTA1P02549 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTA1P02549 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SPTA1P02549 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.3□□□□□ -0.12
SPTA1P02549 AC136604.1-201ENST00000418535 575 ntBASIC14.3□□□□□ -0.12
SPTA1P02549 SPTLC1P5-201ENST00000450718 252 ntBASIC14.3□□□□□ -0.12
SPTA1P02549 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTA1P02549 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 RN7SL818P-201ENST00000485099 259 ntBASIC14.3□□□□□ -0.12
SPTA1P02549 AC026410.3-201ENST00000514280 936 ntBASIC14.3□□□□□ -0.12
SPTA1P02549 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTA1P02549 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
SPTA1P02549 RN7SL725P-201ENST00000606439 259 ntBASIC14.3□□□□□ -0.12
SPTA1P02549 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.3□□□□□ -0.12
SPTA1P02549 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SPTA1P02549 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
SPTA1P02549 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SPTA1P02549 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTA1P02549 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.3□□□□□ -0.12
SPTA1P02549 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.3□□□□□ -0.12
SPTA1P02549 AC008764.6-201ENST00000595909 2069 ntBASIC14.3□□□□□ -0.12
SPTA1P02549 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SPTA1P02549 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPTA1P02549 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms