Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
USH2AO75445 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC6.9□□□□□ -1.31
USH2AO75445 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC6.9□□□□□ -1.31
USH2AO75445 AC106047.2-201ENST00000511723 743 ntBASIC6.9□□□□□ -1.31
USH2AO75445 RBM8B-201ENST00000555532 525 ntBASIC6.9□□□□□ -1.31
USH2AO75445 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC6.9□□□□□ -1.31
USH2AO75445 AC026803.1-201ENST00000569130 274 ntBASIC6.9□□□□□ -1.31
USH2AO75445 AC124068.2-201ENST00000569473 1109 ntBASIC6.9□□□□□ -1.31
USH2AO75445 HPN-206ENST00000597419 1212 ntTSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.31
USH2AO75445 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
USH2AO75445 CA12-203ENST00000422263 2556 ntTSL 2 BASIC6.9□□□□□ -1.31
USH2AO75445 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC6.9□□□□□ -1.31
USH2AO75445 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
USH2AO75445 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC6.9□□□□□ -1.31
USH2AO75445 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 AL353637.1-201ENST00000451571 732 ntBASIC6.89□□□□□ -1.31
USH2AO75445 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC6.89□□□□□ -1.31
USH2AO75445 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 AC027237.1-201ENST00000560942 655 ntBASIC6.89□□□□□ -1.31
USH2AO75445 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 AC136759.1-202ENST00000530858 2194 ntBASIC6.89□□□□□ -1.31
USH2AO75445 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 AC024293.1-201ENST00000467930 498 ntBASIC6.89□□□□□ -1.31
USH2AO75445 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC6.89□□□□□ -1.31
USH2AO75445 MIR3677-201ENST00000578964 60 ntBASIC6.89□□□□□ -1.31
USH2AO75445 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 TBC1D3J-201ENST00000620719 1426 ntBASIC6.89□□□□□ -1.31
USH2AO75445 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
USH2AO75445 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 RPL18AP3-201ENST00000462885 528 ntBASIC6.89□□□□□ -1.31
USH2AO75445 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC6.89□□□□□ -1.31
USH2AO75445 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
USH2AO75445 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC6.89□□□□□ -1.31
USH2AO75445 AMT-204ENST00000427987 1646 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC6.89□□□□□ -1.31
USH2AO75445 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC6.89□□□□□ -1.31
USH2AO75445 MVK-214ENST00000629016 1591 ntTSL 5 BASIC6.89□□□□□ -1.31
USH2AO75445 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC6.89□□□□□ -1.31
USH2AO75445 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
USH2AO75445 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
USH2AO75445 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC6.88□□□□□ -1.31
USH2AO75445 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms