Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRIM3O75382 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM3O75382 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM3O75382 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM3O75382 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM3O75382 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 AC024267.1-201ENST00000582320 895 ntBASIC14.87□□□□□ -0.03
TRIM3O75382 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM3O75382 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM3O75382 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM3O75382 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.87□□□□□ -0.03
TRIM3O75382 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM3O75382 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM3O75382 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM3O75382 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM3O75382 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM3O75382 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRIM3O75382 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM3O75382 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
TRIM3O75382 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRIM3O75382 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM3O75382 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM3O75382 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 MIR943-201ENST00000401286 94 ntBASIC14.86□□□□□ -0.03
TRIM3O75382 AL353705.2-201ENST00000428243 662 ntBASIC14.86□□□□□ -0.03
TRIM3O75382 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM3O75382 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 AC061975.2-201ENST00000581722 295 ntBASIC14.86□□□□□ -0.03
TRIM3O75382 AC005498.2-205ENST00000593218 784 ntBASIC14.86□□□□□ -0.03
TRIM3O75382 AL390955.2-201ENST00000603032 514 ntBASIC14.86□□□□□ -0.03
TRIM3O75382 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM3O75382 U82695.1-201ENST00000635752 1889 ntBASIC14.86□□□□□ -0.03
TRIM3O75382 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM3O75382 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM3O75382 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM3O75382 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM3O75382 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM3O75382 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM3O75382 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM3O75382 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM3O75382 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.85□□□□□ -0.03
TRIM3O75382 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM3O75382 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM3O75382 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM3O75382 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM3O75382 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM3O75382 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM3O75382 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRIM3O75382 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRIM3O75382 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM3O75382 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM3O75382 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms