Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.82■□□□□ 0.92
APAF1O14727 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.82■□□□□ 0.92
APAF1O14727 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.82■□□□□ 0.92
APAF1O14727 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
APAF1O14727 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.82■□□□□ 0.92
APAF1O14727 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
APAF1O14727 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.81■□□□□ 0.92
APAF1O14727 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
APAF1O14727 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.81■□□□□ 0.92
APAF1O14727 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.81■□□□□ 0.92
APAF1O14727 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.81■□□□□ 0.92
APAF1O14727 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
APAF1O14727 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
APAF1O14727 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.81■□□□□ 0.92
APAF1O14727 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
APAF1O14727 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
APAF1O14727 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.81■□□□□ 0.92
APAF1O14727 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
APAF1O14727 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.8■□□□□ 0.92
APAF1O14727 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
APAF1O14727 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
APAF1O14727 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.8■□□□□ 0.92
APAF1O14727 INGX-202ENST00000489074 768 ntBASIC20.8■□□□□ 0.92
APAF1O14727 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.8■□□□□ 0.92
APAF1O14727 AC135586.1-201ENST00000539323 574 ntBASIC20.8■□□□□ 0.92
APAF1O14727 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
APAF1O14727 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.8■□□□□ 0.92
APAF1O14727 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.8■□□□□ 0.92
APAF1O14727 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.8■□□□□ 0.92
APAF1O14727 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.8■□□□□ 0.92
APAF1O14727 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 AC073347.1-201ENST00000421633 2643 ntBASIC20.8■□□□□ 0.92
APAF1O14727 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.8■□□□□ 0.92
APAF1O14727 PPT1-215ENST00000641471 2368 ntBASIC20.8■□□□□ 0.92
APAF1O14727 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
APAF1O14727 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
APAF1O14727 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.79■□□□□ 0.92
APAF1O14727 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
APAF1O14727 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.79■□□□□ 0.92
APAF1O14727 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 MIR661-201ENST00000384842 89 ntBASIC20.79■□□□□ 0.92
APAF1O14727 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.79■□□□□ 0.92
APAF1O14727 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.79■□□□□ 0.92
APAF1O14727 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.79■□□□□ 0.92
APAF1O14727 SLED1-202ENST00000512051 380 ntBASIC20.79■□□□□ 0.92
APAF1O14727 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.79■□□□□ 0.92
APAF1O14727 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.79■□□□□ 0.92
APAF1O14727 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
APAF1O14727 BTBD7P1-201ENST00000447253 1453 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms