Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
CDC7O00311 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.59■□□□□ 0.09
CDC7O00311 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.58■□□□□ 0.09
CDC7O00311 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.58■□□□□ 0.09
CDC7O00311 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDC7O00311 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDC7O00311 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CDC7O00311 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDC7O00311 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.58■□□□□ 0.09
CDC7O00311 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDC7O00311 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDC7O00311 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CDC7O00311 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.58■□□□□ 0.08
CDC7O00311 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC7O00311 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDC7O00311 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.58■□□□□ 0.08
CDC7O00311 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC7O00311 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.58■□□□□ 0.08
CDC7O00311 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.58■□□□□ 0.08
CDC7O00311 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.58■□□□□ 0.08
CDC7O00311 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDC7O00311 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.58■□□□□ 0.08
CDC7O00311 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CDC7O00311 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.58■□□□□ 0.08
CDC7O00311 AC097359.3-201ENST00000603982 1210 ntBASIC15.58■□□□□ 0.08
CDC7O00311 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.58■□□□□ 0.08
CDC7O00311 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC7O00311 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 AL109954.1-202ENST00000564051 2148 ntBASIC15.58■□□□□ 0.08
CDC7O00311 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDC7O00311 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.58■□□□□ 0.08
CDC7O00311 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.57■□□□□ 0.08
CDC7O00311 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.57■□□□□ 0.08
CDC7O00311 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.57■□□□□ 0.08
CDC7O00311 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.57■□□□□ 0.08
CDC7O00311 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.57■□□□□ 0.08
CDC7O00311 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.57■□□□□ 0.08
CDC7O00311 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDC7O00311 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.57■□□□□ 0.08
CDC7O00311 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CDC7O00311 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.57■□□□□ 0.08
CDC7O00311 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 AC023141.5-201ENST00000458585 616 ntBASIC15.57■□□□□ 0.08
CDC7O00311 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.57■□□□□ 0.08
CDC7O00311 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.57■□□□□ 0.08
CDC7O00311 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.57■□□□□ 0.08
CDC7O00311 AC006486.2-201ENST00000624246 2199 ntBASIC15.57■□□□□ 0.08
CDC7O00311 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDC7O00311 AC112693.3-201ENST00000624819 1983 ntBASIC15.56■□□□□ 0.08
CDC7O00311 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDC7O00311 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDC7O00311 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.56■□□□□ 0.08
CDC7O00311 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.56■□□□□ 0.08
CDC7O00311 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.56■□□□□ 0.08
CDC7O00311 MIR4453-201ENST00000584019 89 ntBASIC15.56■□□□□ 0.08
CDC7O00311 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.56■□□□□ 0.08
CDC7O00311 AL133215.2-201ENST00000609242 977 ntBASIC15.56■□□□□ 0.08
CDC7O00311 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.56■□□□□ 0.08
CDC7O00311 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDC7O00311 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms