Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AC022616.7-201ENST00000525383 220 ntBASIC11.67□□□□□ -0.54
SMKR1H3BMG3 TPSP2-201ENST00000561760 610 ntBASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AL136038.3-201ENST00000561909 1096 ntBASIC11.67□□□□□ -0.54
SMKR1H3BMG3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AL022326.1-202ENST00000641533 845 ntBASIC11.67□□□□□ -0.54
SMKR1H3BMG3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.67□□□□□ -0.54
SMKR1H3BMG3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 AC011477.6-201ENST00000604980 1927 ntBASIC11.66□□□□□ -0.54
SMKR1H3BMG3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 AJ011931.1-201ENST00000618749 2492 ntBASIC11.66□□□□□ -0.54
SMKR1H3BMG3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 NUS1P2-201ENST00000417358 873 ntBASIC11.66□□□□□ -0.54
SMKR1H3BMG3 HCG4-201ENST00000418983 998 ntBASIC11.66□□□□□ -0.54
SMKR1H3BMG3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 AP001269.4-201ENST00000609611 512 ntBASIC11.66□□□□□ -0.54
SMKR1H3BMG3 AF228730.7-201ENST00000641842 219 ntBASIC11.66□□□□□ -0.54
SMKR1H3BMG3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 AC041040.2-201ENST00000622926 2899 ntBASIC11.66□□□□□ -0.54
SMKR1H3BMG3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMKR1H3BMG3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMKR1H3BMG3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms