Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 AL139400.1-201ENST00000366220 510 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 AL133267.1-201ENST00000398220 340 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 AC074338.1-201ENST00000416825 156 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14□□□□□ -0.17
NPIPB4C9JG80 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14□□□□□ -0.17
NPIPB4C9JG80 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AC051619.7-201ENST00000568314 623 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AC015910.1-201ENST00000579400 975 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14□□□□□ -0.17
NPIPB4C9JG80 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AL596442.2-201ENST00000610240 980 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 TEX28P1-201ENST00000613479 1221 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 TEX28P2-201ENST00000617764 1221 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB4C9JG80 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
NPIPB4C9JG80 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB4C9JG80 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB4C9JG80 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14□□□□□ -0.17
NPIPB4C9JG80 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 AC084364.1-201ENST00000551967 1556 ntBASIC14□□□□□ -0.17
NPIPB4C9JG80 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NPIPB4C9JG80 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NPIPB4C9JG80 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NPIPB4C9JG80 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 TUBB3P1-201ENST00000405796 1332 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 RPL13P2-201ENST00000440687 659 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 KLF2P3-201ENST00000451977 1087 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AC140878.1-201ENST00000565277 250 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AC074044.1-201ENST00000609673 707 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 SPDYE12P-201ENST00000618416 771 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AC023511.2-201ENST00000618803 211 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AC073592.8-201ENST00000624126 511 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 Z92544.3-201ENST00000624747 417 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 AL645728.2-202ENST00000641679 227 ntBASIC13.99□□□□□ -0.17
NPIPB4C9JG80 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB4C9JG80 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms