Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 DFFBP1-201ENST00000433250 979 ntBASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 API5-211ENST00000534695 560 ntTSL 5 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SLC7A15P-201ENST00000424028 1363 ntBASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 AC009090.5-201ENST00000624886 2285 ntBASIC16.47■□□□□ 0.23
YJEFN3A6XGL0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CRB3P1-201ENST00000449338 276 ntBASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CHCHD2P3-201ENST00000603038 451 ntBASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
YJEFN3A6XGL0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
YJEFN3A6XGL0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
YJEFN3A6XGL0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
YJEFN3A6XGL0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
YJEFN3A6XGL0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
YJEFN3A6XGL0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.45■□□□□ 0.22
YJEFN3A6XGL0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms