Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC162PA2VCL2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 HNRNPUP1-201ENST00000554987 333 ntBASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 AC139530.3-201ENST00000620344 690 ntBASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC162PA2VCL2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 AC020658.6-201ENST00000623564 1870 ntBASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 HIST3H2BA-201ENST00000436555 524 ntBASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 AC097359.3-201ENST00000603982 1210 ntBASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 Z92544.3-201ENST00000624747 417 ntBASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 AC092384.3-202ENST00000564646 2873 ntBASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC162PA2VCL2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC162PA2VCL2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms