Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRBV6-7A0A0A0MS04 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC098859.1-201ENST00000502915 1238 ntBASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC243562.2-201ENST00000561247 970 ntBASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC073389.1-201ENST00000595595 795 ntBASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC064836.3-201ENST00000607928 673 ntBASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 NORAD-201ENST00000565493 5339 ntBASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-7A0A0A0MS04 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC005840.4-201ENST00000541242 2494 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC002056.1-201ENST00000395613 760 ntBASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.29□□□□□ -0.28
TRBV6-7A0A0A0MS04 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms