Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 PCGF3-213ENST00000620529 1899 ntBASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 AL009178.2-201ENST00000597278 2719 ntBASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX49Q9Y6V7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 AL035633.1-201ENST00000406139 838 ntBASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 KRT18P32-201ENST00000424695 1287 ntBASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX49Q9Y6V7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.14■□□□□ 0.66
DDX49Q9Y6V7 AC136621.1-201ENST00000624017 2304 ntBASIC19.14■□□□□ 0.66
DDX49Q9Y6V7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
DDX49Q9Y6V7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
DDX49Q9Y6V7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DDX49Q9Y6V7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
DDX49Q9Y6V7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.14■□□□□ 0.66
DDX49Q9Y6V7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 KRT8P39-201ENST00000396270 1433 ntBASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX49Q9Y6V7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 RBPMS2P1-201ENST00000437762 623 ntBASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 FAM86GP-201ENST00000448322 971 ntBASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 AL138918.1-201ENST00000568306 659 ntBASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX49Q9Y6V7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms