Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC044860.1-202ENST00000559481 777 ntBASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 MIR6069-201ENST00000620069 79 ntBASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 BTBD7P1-201ENST00000447253 1453 ntBASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 SPTLC1P1-201ENST00000447199 261 ntBASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 AC135586.1-201ENST00000539323 574 ntBASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL4A3BPQ9Y5P4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COL4A3BPQ9Y5P4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.72■□□□□ 0.43
COL4A3BPQ9Y5P4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms