Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 AC133539.2-201ENST00000604757 467 ntBASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
CTDP1Q9Y5B0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 AC234783.1-201ENST00000441761 496 ntBASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 AL158212.4-201ENST00000624062 1286 ntBASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTDP1Q9Y5B0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.3■□□□□ 0.52
CTDP1Q9Y5B0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 AGGF1P2-201ENST00000426656 2106 ntBASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CTDP1Q9Y5B0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms