Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
COPS3Q9UNS2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 AC091951.1-201ENST00000512854 2465 ntBASIC14.22□□□□□ -0.13
COPS3Q9UNS2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 BCAR1-209ENST00000546196 1340 ntBASIC14.22□□□□□ -0.13
COPS3Q9UNS2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.22□□□□□ -0.13
COPS3Q9UNS2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 AC004877.2-201ENST00000623941 599 ntBASIC14.22□□□□□ -0.13
COPS3Q9UNS2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 WASH6P-202ENST00000359512 1437 ntBASIC14.22□□□□□ -0.13
COPS3Q9UNS2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.22□□□□□ -0.13
COPS3Q9UNS2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 C18orf15-201ENST00000623680 2534 ntBASIC14.21□□□□□ -0.13
COPS3Q9UNS2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.21□□□□□ -0.13
COPS3Q9UNS2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
COPS3Q9UNS2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
COPS3Q9UNS2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.21□□□□□ -0.14
COPS3Q9UNS2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
COPS3Q9UNS2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
COPS3Q9UNS2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
COPS3Q9UNS2 MIR600HG-201ENST00000449175 5984 ntBASIC14.21□□□□□ -0.14
COPS3Q9UNS2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COPS3Q9UNS2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms