Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 UGT1A2P-201ENST00000454886 866 ntBASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 AC135586.1-201ENST00000539323 574 ntBASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHA4Q9UN74 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AC009090.5-201ENST00000624886 2285 ntBASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AC015922.1-201ENST00000421102 1152 ntBASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 FAM8A3P-201ENST00000427218 844 ntBASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 SPDYE18-201ENST00000510091 1050 ntBASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AC092337.1-201ENST00000568699 1129 ntBASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHA4Q9UN74 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHA4Q9UN74 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms