Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPC1L1Q9UHC9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 AC136621.1-201ENST00000624017 2304 ntBASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 CU639417.3-201ENST00000624240 1404 ntBASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPC1L1Q9UHC9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AP006294.1-201ENST00000415407 339 ntBASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 SOCS2P1-201ENST00000417727 557 ntBASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AL162726.2-201ENST00000438986 1017 ntBASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 ENPP7P5-201ENST00000541031 1031 ntBASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AC005252.2-201ENST00000624630 1141 ntBASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 PRSS30P-206ENST00000641773 873 ntBASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NPC1L1Q9UHC9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 C1QBPP1-201ENST00000400117 770 ntBASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 AC012645.4-201ENST00000610691 1061 ntBASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 C18orf15-201ENST00000623680 2534 ntBASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
NPC1L1Q9UHC9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms