Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 BTNL10-201ENST00000595971 695 ntBASIC16.19■□□□□ 0.18
EBF1Q9UH73 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.19■□□□□ 0.18
EBF1Q9UH73 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
EBF1Q9UH73 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 KRT43P-201ENST00000434019 910 ntBASIC16.18■□□□□ 0.18
EBF1Q9UH73 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 SNX29P1-201ENST00000548357 1007 ntBASIC16.18■□□□□ 0.18
EBF1Q9UH73 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 AL365330.1-201ENST00000607459 531 ntBASIC16.18■□□□□ 0.18
EBF1Q9UH73 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 CDC14C-201ENST00000428251 1719 ntBASIC16.18■□□□□ 0.18
EBF1Q9UH73 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 LINC02228-204ENST00000642115 2962 ntBASIC16.18■□□□□ 0.18
EBF1Q9UH73 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF1Q9UH73 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
EBF1Q9UH73 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 CLK3P2-201ENST00000427566 1453 ntBASIC16.17■□□□□ 0.18
EBF1Q9UH73 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AC104989.1-201ENST00000519711 778 ntBASIC16.17■□□□□ 0.18
EBF1Q9UH73 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AC010319.3-201ENST00000597028 470 ntBASIC16.17■□□□□ 0.18
EBF1Q9UH73 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 CYP4F24P-201ENST00000586049 1580 ntBASIC16.17■□□□□ 0.18
EBF1Q9UH73 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
EBF1Q9UH73 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF1Q9UH73 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms