Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 LINC01783-202ENST00000614408 828 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 BX284668.2-205ENST00000619677 828 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AC002472.3-201ENST00000640124 621 ntBASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RIMBP3Q9UFD9 AC244394.1-201ENST00000435000 1665 ntBASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 GDNF-207ENST00000515058 764 ntTSL 5 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 CTBP2P6-201ENST00000526402 1229 ntBASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 MIR6769A-201ENST00000617340 73 ntBASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RIMBP3Q9UFD9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AL672207.1-201ENST00000328462 1570 ntBASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AC106827.1-201ENST00000366454 431 ntBASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AC023906.1-201ENST00000486386 453 ntBASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AL603756.1-201ENST00000606511 2163 ntBASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 KRT18P9-201ENST00000604826 1300 ntBASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 AC093503.3-201ENST00000624917 2352 ntBASIC24.3■■□□□ 1.48
RIMBP3Q9UFD9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 MBP-238ENST00000580402 915 ntTSL 5 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 AL603764.1-201ENST00000636452 321 ntBASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 AC020931.1-201ENST00000589622 1346 ntBASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RIMBP3Q9UFD9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 PTGER4P2-201ENST00000328411 252 ntBASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 PTGER4P3-201ENST00000458150 252 ntBASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 RN7SL494P-201ENST00000461517 304 ntBASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 MIR4313-201ENST00000580760 101 ntBASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RIMBP3Q9UFD9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms