Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 CYP4F24P-201ENST00000586049 1580 ntBASIC16.6■□□□□ 0.25
PPARGC1AQ9UBK2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC126755.1-201ENST00000525846 6405 ntBASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 HLA-V-204ENST00000476601 1289 ntBASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC069120.2-201ENST00000524091 540 ntBASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AL158211.3-201ENST00000607385 239 ntBASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AP002414.2-201ENST00000591780 3365 ntBASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.59■□□□□ 0.25
PPARGC1AQ9UBK2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 AC126177.1-201ENST00000547829 2218 ntBASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPARGC1AQ9UBK2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 EEF1DP4-201ENST00000446006 880 ntBASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 CETN4P-206ENST00000642099 2168 ntBASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPARGC1AQ9UBK2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.57■□□□□ 0.24
PPARGC1AQ9UBK2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms