Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.67■□□□□ 0.1
MKS1Q9NXB0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MKS1Q9NXB0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 SNX18-202ENST00000343017 3140 ntBASIC15.65■□□□□ 0.1
MKS1Q9NXB0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 AL139010.1-201ENST00000454878 894 ntBASIC15.65■□□□□ 0.1
MKS1Q9NXB0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 Z83851.2-201ENST00000609564 659 ntBASIC15.65■□□□□ 0.1
MKS1Q9NXB0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 AKAP8P1-201ENST00000434743 1349 ntBASIC15.65■□□□□ 0.1
MKS1Q9NXB0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MKS1Q9NXB0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms